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Metabolite systems profiling identifies exploitable weaknesses in retinoblastoma

Authors
Swagatika Sahoo , Ranjith Kumar Ravi Kumar , Brandon Nicolay , Omkar Mohite , Karthikeyan Sivaraman , Vikas Khetan , Pukhraj Rishi , Suganeswari Ganesan , Krishnakumar Subramanyan , Karthik Raman , Wayne Miles , Sailaja V. Elchuri
Published In
FEBS Letters, vol. 593, no. 1, p. 23-41

Retinoblastoma (RB) is a childhood eye cancer. Currently, chemotherapy, local therapy, and enucleation are the main ways in which these tumors are managed. The present work is the first study that uses constraint-based reconstruction and analysis approaches to identify and explain RB-specific survival strategies, which are RB tumor specific. Importantly, our model-specific secretion profile is also found in RB1-depleted human retinal cells in vitro and suggests that novel biomarkers involved in lipid metabolism may be important. Finally, RB-specific synthetic lethals have been predicted as lipid and nucleoside transport proteins that can aid in novel drug target development., added-at = 2019-02-10T15:54:29.000+0100